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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs10106250 chr8:11581846 A/G TRIM35 chr8:27142404-27168836:- 0.57 6.53 2.12E-10 Box Plot
BLCA rs10106250 chr8:11581846 A/G VPS37A chr8:17104080-17159936:+ 0.76 8.92 2.02E-17 Box Plot
BLCA rs10106250 chr8:11581846 A/G WRN chr8:30891317-31031285:+ 0.51 6.52 2.16E-10 Box Plot
BLCA rs10106250 chr8:11581846 A/G XPO7 chr8:21777182-21864096:+ 0.77 8.87 2.91E-17 Box Plot
BLCA rs10106962 chr8:6361016 C/T ASAH1 chr8:17913501-17942507:- -0.64 -7.02 9.89E-12 Box Plot
BLCA rs10106962 chr8:6361016 C/T CDCA2 chr8:25316513-25365436:+ -0.57 -6.14 2.03E-9 Box Plot
BLCA rs10106962 chr8:6361016 C/T CHMP7 chr8:23101150-23119513:+ -0.81 -6.4 4.53E-10 Box Plot
BLCA rs10106962 chr8:6361016 C/T CNOT7 chr8:17082473-17104387:- -0.81 -6.17 1.74E-9 Box Plot
BLCA rs10106962 chr8:6361016 C/T INTS9 chr8:28625178-28747759:- -0.85 -6.2 1.46E-9 Box Plot
BLCA rs10106962 chr8:6361016 C/T KIAA1967 chr8:22462257-22477981:+ -0.81 -6.09 2.76E-9 Box Plot
BLCA rs10106962 chr8:6361016 C/T PBK chr8:27667137-27695612:- -0.6 -6.2 1.46E-9 Box Plot
BLCA rs10106962 chr8:6361016 C/T PINX1 chr8:10622473-10697394:- -0.69 -6.11 2.45E-9 Box Plot
BLCA rs10106962 chr8:6361016 C/T TMEM66 chr8:29920528-29939940:- -0.77 -6.52 2.23E-10 Box Plot
BLCA rs10106962 chr8:6361016 C/T TNKS chr8:9413424-9639856:+ -0.74 -6.89 2.31E-11 Box Plot
BLCA rs10108008 chr8:13064434 C/G AGPAT5 chr8:6565878-6617187:+ -0.72 -6.32 7.23E-10 Box Plot